Mykrobe panel typhi version 20221208

Figshare2022-12-08 更新2026-04-28 收录

伤寒沙门氏菌基因检测

耐药性预测

数据链接：

https://figshare.com/articles/dataset/Mykrobe_panel_typhi_version_20221208/21695528 数据链接链接失效反馈

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资源简介：

This is typhi panel data version 20221208, to be used by the command line tool mykrobe.

创建时间：

2022-12-08

Test reads for mykrobe predict

基因组测序

耐药性预测

Small FASTQ file of reads for testing mykrobe predict. These are simulated reads that are identical to the reference genome H37Rv, except for the variant inhA I21T, which implies isoniazid resistance.

NIAID Data Ecosystem80

Correlation of Clinicopathological Characteristics with ABCC4 Expression in 121 LARC Patients Treated with Preoperative nRT.

结直肠癌分子病理学

耐药性预测

Abbreviations: ABCC4, ATP-binding cassette subfamily C member 4; CA19-9, carbohydrate antigen 19-9; CEA, carcinoembryonic antigen; LARC, locally advanced rectal carcinoma; nRT, neoadjuvant radiotherap

NIAID Data Ecosystem50

Use of whole genome sequencing to explore Mycobacterium tuberculosis complex circulating in a hotspot department in France

结核病基因组学

耐药性预测

Seine-Saint-Denis is the French metropolitan department with the highest incidence of Tuberculosis (TB). Whole-genome sequencing (WGS) is still a relatively novel approach for TB strain analysis. Our

NIAID Data Ecosystem30

Additional file 7 of Using random forest to predict antimicrobial minimum inhibitory concentrations of nontyphoidal Salmonella in Taiwan

耐药性预测

基因组数据分析

Additional file 7. The validation performance using the validation dataset and top k-mers.

NIAID Data Ecosystem70

Data_Sheet_1_Improved Resistance Prediction in Mycobacterium tuberculosis by Better Handling of Insertions and Deletions, Premature Stop Codons, and Filtering of Non-informative Sites.ZIP

耐药性预测

基因组分析

Resistance in Mycobacterium tuberculosis is a major obstacle for effective treatment of tuberculosis. Multiple studies have shown promising results for predicting drug resistance in M. tuberculosis ba

NIAID Data Ecosystem30

Mykrobe panel typhi version 20221208

资源简介：

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