Multiple gene co-options underlie the rapid evolution of sexually deceptive flowers in Gorteria diffusa

Study:

Multiple gene co-options underlie the rapid evolution of sexually deceptive flowers in Gorteria diffusa

Authors:

Roman T. Kellenberger, Udhaya Ponraj, Boris Delahaie, Róisín Fattorini, Janneke Balk, Sara Lopez-Gomollon, Karin H. Müller, Allan G. Ellis, Beverley J. Glover

Annotations:

gzip compressed table containing Trinotate protein predictions and annotations of the Trinity transcripts from the combined G. diffusa Springbok / Naries reference transcriptome (deposited on NCBI TSA under accession GKEE00000000).

Differential expression:

gzip compressed tables containing the results of the EdgeR mRNA differential expression analyses.

Sheet A_Springbok_spotted_vs_unspott. contains the results of the differential expression analysis between spotted and unspotted ray florets of Gorteria diffusa Springbok.
Sheet B_Springbok_spotted_vs_Naries contains the results of the differential expression analysis between spotted G. diffusa Springbok and spotted G. diffusa Naries ray florets.
Sheet C_Intersection_A_and_B contains the intersection of the two previous tables, i.e. the Trinity transcripts differentially expressed both between spotted and unspotted G. diffusa Springbok ray florets, and between G. diffusa Springbok and Naries spotted ray florets.

ICP-OES:

gzip compressed table containing sample input weights and volumes, and the results of the ICP-OES measurements of Iron, Zinc and Manganese concentrations in entire and divided G. diffusa spotted and unspotted ray florets.

EXPA MrBayes:

Fasta file used for the MyBayes phylogenetic analysis containing the aligned protein sequences of the two conserved expansin domains from Arabidopsis thaliana EXPA1-18 and 20-25, Helianthus annuus EXPA1, 4 and 6-11, and Gorteria diffusa EXPA1, 7 and 15.

Differential expression small RNA:

gzip compressed tables containing the results of the EdgeR small RNA differential expression analyses.

Sheet A_aligned_to_supertranscripts contains the results of the small RNA differential expression analysis between spotted and unspotted ray florets of Gorteria diffusa Springbok using Trinity supertranscripts as reference.
Sheet B_aligned_to_mirbase contains the results of the small RNA differential expression analysis between spotted and unspotted ray florets of Gorteria diffusa Springbok using the miRbase database as reference.

miRNAs:

Fasta file containing the hairpin precursor sequences of pri-GdmiR156 and pri-GdmiR162 as well as the mature GdMIR156 and GdMIR162 sequences.