Genome assembly of E. coli strain mixes

Long-read sequencing with MinION for the detection of STEC in culture swipes harboring different combinations of STEC and STEC-LST and other E. coli strains. E. coli strains in each assembly: Experiment 1 STEC O145:H28 (~10%) + STEC-LST O145:H28 (~90%). Experiment 2 STEC O145:H28 (~10%) STEC-LST O145:H28 ~7%) EPEC O21 (~23%) EAEC O104:H4 (~29%) ExPEC O6:H31 (~29%) Experiment 3 STEC O145:H28 (~1-2%) STEC-LST O145:H28 (~21%) EPEC O21 (~12%) EAEC O104:H4 (~37%) ExPEC O6:H31 (~27%)