List of assigned species for each single-species library and pipeline.
收藏Figshare2022-10-25 更新2026-04-28 收录
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https://figshare.com/articles/dataset/List_of_assigned_species_for_each_single-species_library_and_pipeline_/21395781
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The pipelines are specified as the sheet name being BM: BLASTn + MEGAN6 pipeline; K2: Kraken2 pipeline; Unions: Union of results by BM and K2; and Intersection: Intersection of results by BM and K2. Species assignments are divided in five blocks: A: species with a relative abundance greater or equal than ε = 0.01; B: species with abundance between ε = 0.01 and ε = 0.001; C: species with abundance between ε = 0.001 and ε = 0.0001; D: species with abundance below ε = 0.0001; E: potential contaminants. For each identified species, we indicate the species name and, in brackets, the number of assigned reads and their relative abundance separated by "|". (XLSX)
创建时间:
2022-10-25



