List of 176 B. cenocepacia H111 genes/proteins that showed differential expression in micro-oxic (M) conditions compared to aerobic (A) conditions (DESeq analysis, p-value<0.15 for proteomics and p-value<0.2 for RNA-Seq).

aNomenclature and description according to GenBank file CAFQ01000001.1.bOrthologs were identified as described in the Material and Methods section.cPredicted topology (Tp) according to SignalP v4.0 (secreted proteins, S) and TMHMM v2.0 (transmembrane, TM).dFold change (FC) of protein expression, comparing micro-oxically (M) with aerobically (A) grown wild-type strain.eFold change (FC) of transcript expression, comparing micro-oxically (M) with aerobically (A) grown wild-type strain.nd: The gene was not identified on protein level.M only and A only: The gene/protein was detected only micro-oxically (M) or aerobically (A).The proNOG categories are indicated and the 58 differentially expressed proteins are indicated in bold. The overlap in low oxygen regulation with strain J2315 (Sass et al., 2013) is indicated in italics.