Neu_OXT RNAseq results

Neu_OXT RNAseq results Reads were trimmed to remove adapters using TrimGalore (v0.6.5). Trimmed reads were checked using FASTQC (v0.11.7), aligned and quantified with STAR (v2.7.5) to ENSEMBL human genome assembly and annotation (GRCh38 release 103). Differential gene expression between CTL and MD samples was analyzed with SARTools R package (v1.7.3). Mapping between ENSEMBL gene identifiers and Entrez gene accession (gene names) or HGNC symbols was performed using the biomaRt R package (v2.46.3). GeneOntology analysis of differentially expressed genes was performed using gProfiler2 (v0.2.0). Folder results-20212604: This folder contain new files regarding the analysis of the NEU_OXT dataset. Files labelled *_batch correspond to analyses where the batch effect has been modelized . Some analyses were performed on a reduced number of replicates.