Monod supporting data

The release of the Monod package (https://github.com/pachterlab/monod) is accompanied by the analysis of several 10X and seqFISH+ datasets to identify trends in transcriptional regulation mechanisms and parameters. This data deposit contains the copy-number data as well as the results of the Monod inference pipeline.

monod_examples_loom_files.tar.gz: raw loom files generated by pseudoaligning Desai, Allen, Mayère, Hwang, Lu, Takei, Khateb and 10x datasets.

monod_examples_fit_results.tar.gz: search results and figures from fitting models to the datasets.

monod_examples.zip: a copy of the project repository (https://github.com/pachterlab/monod_examples).