AC-Barrie WGS vs IWGSC RefSeq v1.0 Genome Assembly

WGS reads of AC-Barrie (http://dx.doi.org/10.1111/j.1467-7652.2012.00717.x) were aligned against the IWGSC Triticum aestivum Chinese Spring RefSeq v1.0 genome assembly using Minimap2. These BAM files (.bam) and index files (.bam.bai) are provided together with a summary of read alignment coverage bigWig files (.bam.bw). SNP variants were called from these BAM files to generate VCF files (.bam.vcf.gz) and index files (.bam.vcf.gz.tbi) and are provided together with a summary of SNP density (SNPs per 10 kbp) bigWig files (.bam.vcf.w10000_s10000.bw). VCF files contain the following filter values and corresponding meaning: PASS = high quality (Q>=30) homozygous; Het = high quality (Q>=30) heterozygous; LowQualHom = low quality (Q

AC-Barrie 的全基因组序列读取数据（http://dx.doi.org/10.1111/j.1467-7652.2012.00717.x）经 Minimap2 对标 IWGSC 的 Triticum aestivum 中国春 RefSeq v1.0 基因组组装进行比对。所生成的 BAM 文件（.bam）及其索引文件（.bam.bai）以及读段比对覆盖率的 bigWig 文件（.bam.bw）一同提供。通过从这些 BAM 文件中调用单核苷酸多态性（SNP）变异，生成了 VCF 文件（.bam.vcf.gz）及其索引文件（.bam.vcf.gz.tbi），并附带了 SNP 密度（每10 kbp中的SNPs数量）的 bigWig 文件（.bam.vcf.w10000_s10000.bw）。VCF 文件包含以下过滤值及其对应含义：PASS = 高质量（Q>=30）纯合子；Het = 高质量（Q>=30）杂合子；LowQualHom = 低质量（Q