Assessing computational predictions of antimicrobial resistance phenotypes from microbial genomes
收藏DataCite Commons2025-04-01 更新2025-04-16 收录
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https://data.mendeley.com/datasets/6vc2msmsxj
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资源简介：
This dataset contains the following materials:
1. ZIP file of txt files. PATRIC Genome IDs and AMR phenotypes, with '1' indicating resistance and '0' indicating susceptibility, for 78 single-species-antibiotic datasets.
2. ZIP file of JSON files. 223 (78+67+78) sets of random folds, phylogeny-aware folds, and homology-aware folds for 78 single-species-antibiotic datasets. Nine sets of homology-aware folds for nine multi-antibiotic datasets, each corresponding to one of nine species. A set of homology-aware folds for evaluating Aytan-Aktug control multi-species model and cross-species model. Nine sets of homology-aware folds for evaluating the Aytan-Aktug leave-one-species-out cross-species model.
3. ZIP file of PDF files. Phylogenetic trees generated by Geno2Pheno for 10 species (including 67 species-antibiotic combinations), annotated with phenotypes and the cross-validation folds for phylogeny-aware and random folds, respectively.
提供机构：
Mendeley Data
创建时间：
2024-02-26
