Data supporting the paper 'Lethal permeabilization of host bacteria to small-molecule compounds during phage penetration'

This dataset includes source data supporting the findings in the research article: "Lethal permeabilization of host bacteria to small-molecule compounds during phage penetration" by Z. Yu, C. Wu, et al. Contents Microscopy: Raw image files used to generate figure panels. Organized into subfolders corresponding to each figure (e.g., Fig1/a/..) and Extended Data / Supplementary Figures (e.g., Supplementary-EDF/EDF1/...). Plate Reader Data: Unprocessed output files from the plate reader (e.g., SourceData-PlateReader-miscCount/EDF1a/...). Quantification and Statistics Spreadsheets (in SourceData-PlateReader-miscCount/). Manually curated cell counts, miscellaneous cell measurements, and raw fluorescence intensity profiles. Processed counts and group comparisons / statistical analysis (GraphPad Prism). Code, Models, and Exported Images for Analysis (Software_CustomScript_ExportedTIFF/): Custom MATLAB/Python scripts used for cell segmentation, image analysis, and plotting. Custom trained or pretrained neural network model weights for automated bacterial cell segmentation. Exported bright-field or fluorescence images (as TIFF files) used for quantification and analysis.