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Expanded palette of RNA base editors for comprehensive RBP-RNA interactome studies. Expanded palette of RNA base editors for comprehensive RBP-RNA interactome studies

NIAID Data Ecosystem2026-05-01 收录

RNA碱基编辑器

RNA相互作用组

数据链接：

https://www.ncbi.nlm.nih.gov/bioproject/PRJNA972650 数据链接链接失效反馈

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资源简介：

This SuperSeries is composed of the SubSeries listed below. Overall design: Refer to individual Series

应用场景：

创建时间：

2023-05-15

神经再生

RNA相互作用组

The goal of this study is to compare the mRNA interactome of different RBPs in regenerating axons utilizing RNA-immunoprecipitation (RIP). Interacting mRNAs to each target RBPs were co-immunoprecipita

NIAID Data Ecosystem70

Comprehensive architecture of the bacterial RNA Interactome

RNA相互作用组

RNA调控机制

RNA-based regulation is ubiquitous in all microbes yet generating a global map of RNA–RNA interactions has been a formidable challenge. Here, TRIC-seq is introduced as an unbiased approach to map tran

NIAID Data Ecosystem40

MGMT mRNA-interacting RNAs of TMZ-treated glioblastoma

胶质母细胞瘤分子机制

RNA相互作用组

To explore the potential RNAs that interacts with MGMT mRNA under TMZ treatment, we performed MGMT mRNA pulldown and high-throughput RNA sequencing on three glioblastoma patients-derived cells.

NIAID Data Ecosystem30

The mRNA interactomes of the homologous Sinorhizobium meliloti trans-sRNAs AbcR1 and AbcR2 determined by MS2-affinity purification coupled with RNA sequencing (MAPS).

RNA相互作用组

基因表达调控

AbcR1/2 tagged at their 5-ends with the MS2 aptamer were used as baits in affinity chromatography with an MS2-MBP fusion protein immobilized on an amylose resin. Wild type sRNAs (without MS2) were use

NIAID Data Ecosystem50

Enhanced RNA Interactome capture (eRIC) and RNA Interactome capture (RIC) of Jurkat cells (DSMZ, ACC-282).

RNA相互作用组

蛋白质组学

1.0 â€“ 1.3 x 10e8 proliferating Jurkat cells at a density of about 1-1.5 x 10e6 cells/mL were employed per sample. Cells were irradiated or not with 254 nm UV light and subjected to eRIC or RIC to de

NIAID Data Ecosystem30

Expanded palette of RNA base editors for comprehensive RBP-RNA interactome studies. Expanded palette of RNA base editors for comprehensive RBP-RNA interactome studies

资源简介：

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