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Novel Bayesian networks for genomic prediction of dynamic traits in biomass sorghum

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DataCite Commons2020-08-01 更新2024-07-13 收录
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http://datacommons.cyverse.org/browse/iplant/home/shared/commons_repo/curated/dos_Santos_Genomic_Prediction_2019
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We are uploading the phenotypic (plant height, dry biomass yield) and genotypic data files used in the publication: Novel Bayesian networks for genomic prediction of dynamic traits in biomass sorghum (dos Santos et al. 2019). Briefly, we genotyped the sorghum diversity panel using the genotyping-by-sequencing (GBS) procedure based on the PstI-HF/HinP1I and PstI-HF/BfaI restriction enzymes. The sequence reads were generated (100 bp length) on a HiSeq 4000 sequencer. Sequence reads were aligned to the Sorghum bicolor genome v3.1 (www.phytozome.jgi.doe.gov). The TASSEL 3 GBS pipeline (www.bytebucket.org/tasseladmin/tassel-5-source) was then used to call variants. The genotypic data file contain the (100,435 loci) variants already processed.
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CyVerse Data Commons
创建时间:
2020-05-14
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