Assessing the local adaptative changes associated with range expansion of the pink stem borer

Understanding the genetic basis of adaptive evolution following habitat expansion can have important implications for pest management. The pink stem borer (PSB), Sesamia inferens (Walker), is a destructive pest of rice that historically restricted to regions south of N34° latitude in China. However, with changes in global climate and farming practices, the distribution of this moth has progressively exceeded its traditional limit of 34° N and encompassed most regions in North China. However, the evolutionary processes and local adaptative changes of this species, are not yet fully understood. Here, we employed genome resequencing to genotype over 1 million of high‐quality SNPs and 20,000 SVs from 14 geographical populations across China. Three highly differentiated genetic groups were formed, corresponding to Northern, Southern China regions and Yunnan-Guizhou Plateau. The pairwise genetic distance between locations was highly correlated with geographic and environmental distance. Our e..., , , # Assessing the local adaptative changes associated with range expansion of the pink stem borer

Whole-genome variant files （snp & sv） and the whole genome phylogenetic tree of pink stem borer Populations

## Description of the data and file structure

All whole-genome structural variant calls
The final product of our structural variant calling pipeline; obtained as described under: \"SNP and SV calling\" in Materials and Methods. This file includes both high-quality SVs.
Sesamia\_inferens.sv.vcf.gz

All whole-genome SNP variant calls
The final product of our structural variant calling pipeline; obtained as described under: \"SNP and SV calling\" in Materials and Methods. This file includes high-quality SNPs.
Sesamia\_inferens.snp.vcf.gz

Main whole genome phylogenetic tree using SNP dataset
Figure 1A
Sesamia\_inferens.snp.nexus

Main whole genome phylogenetic tree using SV dataset
Figure 1D
Sesamia\_inferens.sv.nexus

## Sharing/Access information

The sequence data have been submitted...