Pre-built Symphonypy reference objects that can be downloaded and used to map new query datasets
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下载链接:
https://zenodo.org/record/7568341
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资源简介:
Pre-built Symphonypy reference objects that can be downloaded and used to map new query datasets. The same data as in https://zenodo.org/record/5090425, but for Python port for Symphony.
The Symphony algorithm is used to perform reference mapping to these atlases.
Paper: https://www.nature.com/articles/s41467-021-25957-x
Usage: https://github.com/potulabe/symphonypy
References available for download:
10x PBMCs Atlas (pbmcs_10x_reference.h5ad)
Pancreatic Islet Cells Atlas (pancreas_plate-based_reference.h5ad)
Fetal Liver Hematopoiesis Atlas (fetal_liver_reference_3p.h5ad)
Healthy Fetal Kidney Atlas (kidney_healthy_fetal_reference.h5ad)
T cell CITE-seq atlas (tbru_ref.h5ad)
Cross-tissue Inflammatory Immune Atlas (zhang_reference.h5ad)
Tabula Muris Senis (FACS) Atlas (TMS_facs_reference.h5ad)
创建时间:
2023-02-06



