The first<i> </i><i>De novo</i> Chromosome-level Assembly and Annotation of <i>Petunia hybrida</i><i> </i>Genome
收藏Figshare2024-09-09 更新2026-04-08 收录
下载链接：
https://figshare.com/articles/dataset/_i_De_novo_i_Chromosome-level_Assembly_and_Annotation_of_i_Petunia_hybrida_i_i_i_Genome/26940946/2
下载链接
链接失效反馈官方服务：
资源简介：
<b>Project Title:</b><b>De novo Chromosome-level Assembly and Annotation of </b><b><i>Petunia hybrida</i></b><b> Genome</b><b>Genome Assembly Information:</b><b>Species:</b> <i>Petunia hybrida</i><b>Genome Size:</b> Approximately 1.15 Gb (reported in literature: ~1.3 Gb)<b>Sequence Data:</b> ~120x PacBio data and ~80x Illumina data<b>Genome Assembly and Annotation Tools:</b><b>Canu v1.7</b> for read correction and assembly<b>Optical Mapping (Bionano)</b> and <b>Hi-C</b> for validation and scaffolding<b>Braker3</b> for genome annotation<b>Assembly Statistics:</b>Seven pseudochromosomes, accounting for a total of 1,253.6 Mb<b>BUSCO Completeness:</b> 99.8% based on the viridiplantae-odb10 dataset<b>Gene Prediction and Annotation:</b>A total of 38,613 mRNAs and 34,226 protein-coding genes were predicted.Overall, 28,652 (83.8%) of the predicted gene models were functionally annotated.<br>
提供机构：
Hunter, Donald A.; Grierson, Ella R. P.; Shakya, Shankar; Chagné, David; Ireland, Hilary; Wang, Lei; Barbey, Christopher R.; Esfandiari, Azadeh; Hilario, Elena; David, Charles C.; Boase, Murray R.; King, Ian; Saei, Ali; Kramer, Matthew; Bowman, Megan
创建时间：
2024-09-09
