Evolution in patterns in results on HomoloGene intra-group MF comparisons.

Numbers of pairs of genes changing from one pattern to another when considering our optimal similarity and particularity thresholds instead of the default value of 0.5. After the change of threshold, the most important transition consists in 4,738 results moving from the “- + - or - - +” category (size decreased by 26.8%) to the “+ + - or + - +” category (size increased by 18.5%). The new thresholds give more “+ + +” results but fewer “- - -” results. Globally, the sum of the numbers of the “+ + +” and “- - -” patterns has decreased (-34.8%). Evolution in patterns in results on HomoloGene intra-group MF comparisons.