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Data from: Method of place cell classification determines the population of cells identified

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DataCite Commons2021-03-01 更新2024-07-28 收录
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https://figshare.com/articles/dataset/Data_from_Method_of_place_cell_classification_determines_the_population_of_cells_identified/13560548
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Data from manuscript "Method of place cell classification determines the population of cells identified".<br>Each zip file is one session, with the filename indicating the mouse name and the date of recording (i.e. mouse_date.zip). Each zip file contains a mat-file called 'Fall.mat'. This was generated by using Suite2P<sup>1</sup> on the recordings, which were recorded at 7.51 fps. Within this, F represents the fluorescence traces (ROIs by timepoints), and Fneu represents the neuropil fluorescence traces (ROIs by timepoints). We calculated the fluorescence using: F-0.7*Fneu. For more information on the Suite2P outputs see: https://suite2p.readthedocs.io/en/latest/outputs.html<br>The zip files also contain a mat-file called 'locomotion.mat'. This contains the location trace for each session, scaled between 0-1. The length of the track was 200 cm, so in order to get the location in cm, one can simply do: loco * 200. <br><br>1. Pachitariu, Marius, et al. "Suite2p: beyond 10,000 neurons with standard two-photon microscopy." <i>Biorxiv</i> (2017).
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figshare
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2021-01-12
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