MOESM2 of Comparative genomics reveals a novel genetic organization of the sad cluster in the sulfonamide-degrader ‘Candidatus Leucobacter sulfamidivorax’ strain GP
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Additional file 2: Table S1. Mean coverage and GC content per strain and contig in the metagenome assembly of the consortium consisting of Achromobacter denitrificans PR1 and Candidatus Leubacter sulfamidivorax’ Table S2: Results from CheckM evalution of the draft assembly of the ‘Candidatus Leucobacter sulfamidivorax’ Table S3: List of all bacterial strain used for comparative genomics (T) type stain; (*) sulfanomide degraders; N.A not available; (bold) strains sequenced in this study;(1) available on Github [1]; * the 16S rRNA gene sequence of this strain has a gap between positions 706 and 761;** no rRNA was annotated in this sequence; cells highlighted in orange indicate strain for which the genome sequence became available after November 2018, and, therefore were not included in the comparative genomics studies to assess gene loss in strain GP Table S4: Complete and near complete (1 block missing = 1 ortholog gene missing) modules of the softcore genome of Leucobacter spp. and strain GP reconstructed in silico with KEGG Mapper [56]
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2019-12-06



