A workflow for producing hybrid assemblies.
收藏Figshare2016-02-23 更新2026-04-29 收录
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https://figshare.com/articles/dataset/_A_workflow_for_producing_hybrid_assemblies_/1620113
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Top: SPAdes directly synthesizes short and long reads as inputs to generate hybrid assemblies. Middle: long reads are corrected by PBcR pipeline or by ECTools using short reads and pre-assembled unitigs, respectively, and then the corrected long reads (corrected PacBio long reads, CPBLRs) are assembled de novo by runCA. Bottom: AHA, Cerulean and SSPACE-LongRead are scaffolders that use long read information to scaffold pre-assembled contigs constructed from short reads. In this study, Patch is designed to enhance the hybrid assembly with the corrected long reads (CPBLRs).
创建时间：
2016-02-23
