uCT and histology datasets

uCT and histology datasetsGeneral informationThe rat was in the oestrus phase of its cycle. All slices are along the transverse plane. The organ was stained with PhosphoTungstic Acid (PTA) and the histology slices used Hematoxylin and Eosin (HE) stain.ContentsThe AWA015_PTA_1_Rec_Trans.zip archive contains the original uCT dataset of the full rat uterus. The organ was stained with PTA. The archive contains the .bmp files and the log file.The AWA015_PTA_1_Rec_Trans_muscle_segmentation.zip archive contains the segmentation masks from the full rat uterus slices (png format).The AWA015_PTA_2_Cvx_Rec_Trans.zip archive contains the original uCT dataset of a segment located in the cervix of the rat uterus. The archive contains the .bmp files and the log file.The AWA015_PTA_2_Cev_Rec_Trans.zip archive contains the original uCT dataset of a segment located near the cervix of the left horn of the rat uterus. The archive contains the .bmp files and the log file.The AWA015_PTA_2_Cen_Rec_Trans.zip archive contains the original uCT dataset of a segment located in the centre of the left horn of the rat uterus. The archive contains the .bmp files and the log file.The AWA015_PTA_2_Ova_Rec_Trans.zip archive contains the original uCT dataset of a segment located near the ovaries of the left horn of the rat uterus. The archive contains the .bmp files and the log file.The AWA015_PTA_2_Ova_Rec_Trans_muscle_segmentation.zip archive contains the segmentation masks from the slices of the segment located near the ovaries of the left horn of the rat uterus (png format). The segmentation masks have two labels, one for the circumferential muscles and two for the longitudinal muscles.The downsampled.zip archive contains the downsampled versions of the AWA015_PTA_1_Rec_Trans and AWA015_PTA_2_Ova_Rec_Trans images (png format) as nii.gz archives (NIfTI format) as well as the muscle segmentation masks (png format) as nii.gz archives and downsampling log files. The images were downsampled by a factor of 4 relative to the original datasets. The segmentation masks of AWA015_PTA_2_Ova_Rec_Trans have two labels, one for the circumferential muscles and two for the longitudinal muscles.The AWA015_histology.nii.gz archive contains the histology slices (png format) of different locations (cervix, cervical end, centre, and ovarian end of the right horn in that order) in the rat uterus. The slices were stained with Hematoxylin and Eosin (HE) stain.The AWA015_histology_muscle_segmentation.nii.gz archive contains the masks of the muscle segmentation of the histology slices (png format).

uCT与组织学数据集概述
基本信息
实验大鼠处于其周期中的排卵期。所有切片均沿横切面进行。器官采用磷钨酸（PTA）染色，组织学切片使用苏木精-伊红（HE）染色。
内容
AWA015_PTA_1_Rec_Trans.zip 归档文件包含完整大鼠子宫的原始uCT数据集。器官采用PTA染色。归档文件包含.bmp文件和日志文件。
AWA015_PTA_1_Rec_Trans_muscle_segmentation.zip 归档文件包含完整大鼠子宫切片的分割掩膜（png格式）。
AWA015_PTA_2_Cvx_Rec_Trans.zip 归档文件包含位于大鼠子宫宫颈部分的原始uCT数据集。归档文件包含.bmp文件和日志文件。
AWA015_PTA_2_Cev_Rec_Trans.zip 归档文件包含位于大鼠子宫左侧角近宫颈部分的原始uCT数据集。归档文件包含.bmp文件和日志文件。
AWA015_PTA_2_Cen_Rec_Trans.zip 归档文件包含位于大鼠子宫左侧角中心的原始uCT数据集。归档文件包含.bmp文件和日志文件。
AWA015_PTA_2_Ova_Rec_Trans.zip 归档文件包含位于大鼠子宫左侧角卵巢近侧的原始uCT数据集。归档文件包含.bmp文件和日志文件。
AWA015_PTA_2_Ova_Rec_Trans_muscle_segmentation.zip 归档文件包含位于大鼠子宫左侧角卵巢近侧切片的分割掩膜（png格式）。分割掩膜包含两个标签，一个用于环绕肌肉，两个用于纵向肌肉。
downsampled.zip 归档文件包含AWA015_PTA_1_Rec_Trans和AWA015_PTA_2_Ova_Rec_Trans图像的降采样版本（png格式）以及作为nii.gz归档（NIfTI格式）的肌肉分割掩膜（png格式）和降采样日志文件。图像相对于原始数据集以4倍的比例进行降采样。AWA015_PTA_2_Ova_Rec_Trans的分割掩膜包含两个标签，一个用于环绕肌肉，两个用于纵向肌肉。
AWA015_histology.nii.gz 归档文件包含大鼠子宫不同部位（按顺序为宫颈、宫颈末端、中心、卵巢末端右侧角）的组织学切片（png格式）。切片采用苏木精-伊红（HE）染色。
AWA015_histology_muscle_segmentation.nii.gz 归档文件包含组织学切片的肌肉分割掩膜（png格式）。