Supplementary Data: OpenCOVID model output underlaying Figures 1 and 2 of "Modelling the impact of Omicron and emerging variants on SARS-CoV-2 transmission and public health burden"

Supplementary data files Figure_1.xlsx and Figure_2.xlsx contain the model simulation outcomes for Figures 1 and 2 of Le Rutte, Shattock et al "Modelling the impact of Omicron and emerging variants on SARS-CoV-2 transmission and public health burden" (2022)

Figure 1: Peak daily hospital occupancy (number of beds per 100,000 population over the six-month simulation period) for three variant properties; infectivity (relative to Delta), immune evading capacity (%), and severity (relative to Delta)

Figure 2: Percentage of COVID-19 infections and deaths averted by third-dose vaccines for adults and vaccinating 5-11-year-olds with doses one and two.

Open access source-codes of the associated plotting functions are published here on Zenodo.

Open access source-codes for the OpenCOVID model of all analyses as presented in Le Rutte, Shattock et al. (2022) are publicly available at https://github.com/SwissTPH/OpenCOVID/tree/manuscript_december_2021/src.

Detailed model descriptions and model equations of individual-based transmission model OpenCOVID are described in Shattock et al. (2022) and Le Rutte, Shattock et al. (2022).