遇见数据集

ViruScopeDB: Curated primer dataset for Ebolavirus

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Zenodo2025-09-29 更新2026-05-26 收录
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This dataset contains curated and computationally generated primers for Ebolavirus genomes. The dataset was developed as part of the Master’s thesis project "ViruScopeDB: a comprehensive multi-omics software and database for highly infectious viruses". It integrates oligonucleotide sequences mined from literature (AROLit primers) and in silico generated ones (iSOP primers), validated against a viral genomic alignment. Also included are primer pair suggestions based on a custom scoring model. Data is provided in CSV format with annotations on primer sequence, target region, conservation, and thermodynamic properties. Sheets follow the general logic of All Data > Validated Data > Scored for Conservation Data > Genomic Region Data > Primer Combination Data > Pivot Tables and Graphs.

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Zenodo
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2025-09-29
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