Population-level faecal metagenomic profiling as a tool to predict antimicrobial resistance in Enterobacterales isolates causing invasive infections: A study across three settings in Cambodia, Kenya, and the UK

Supplementary files include the following output datasets: 1 - "Corrected Gene Counts" (CGCs); 2 - "AB_Matrix_1_or_2"; 3 - "AMR-def"; 4 - "AMR-all"; 5 - "Dataset_For_Bayesian_Model" Files to produce these datasets are also provided (see input files) Supplementary files also comprise the results of the Bayesian modelling (See "Steps to reproduce"): 1 - Bayesian Model Comparisons 2 - Bayesian Model Predictions (best model versus null model)