Additional file 6 of Whole-genome sequencing of cryopreserved resources from French Large White pigs at two distinct sampling times reveals strong signatures of convergent and divergent selection between the dam and sire lines

Additional file 6. Functional enrichment for lists of genes within (or flanking) candidate regions under selection. Sheet 1. List of genes within or flanking candidate regions; region name and category are reported for each gene. Sheets 2–4. Enriched functions among genes from all selection categories, based on GOBP (sheet 2), KEGG (sheet 3) or MGI (sheet 4) databases. Sheet 5. Co-annotation enrichment among genes from the LWD, conv(LWD) and div categories. Sheet 6. Co-annotation enrichment among genes from the LWS, conv(LWS) and conv categories. P values were adjusted for multiple tests using the Benjamini–Hochberg correction (BH < 0.05). Co-annotation enrichment (sheets 5–6) was performed with Genecodi4 using the human genome as reference, merging annotations from GOBP, KEGG and MGI databases. The minimal number of genes used to find enrichment is given in brackets; this parameter is 2 or 3 according to the total number of genes per condition tested.