Additional file 1 of SnoRNA copy regulation affects family size, genomic location and family abundance levels

Additional file 1: Table S1. Rfam classified snoRNAs and their characteristics. ‘Expressed’ refers to at least 1 TPM of abundance in one of the 21 samples (7 tissues). Average_TPM, Min_TPM and Max_TPM is the average, max and min values, respectively, of the 21 samples. Tissue_most_expressed_in is the tissue where the average abundance of a tissue is the highest. Conservation_score refers to the average of the “phastCons 100 Vertebrates” score for the entire snoRNA divided by the length of the sequence. Alignement_score is the average pairwise sequence identity score for a snoRNA against all the other members of a family. The coefficient of variation (CV = σ / μ * 100, σ being the standard deviation and μ the mean) was calculated from the mean value of each tissue. Genomic_context displays the location of the snoRNA, which could be either coding (in a protein coding gene), noncoding (in a noncoding gene) or intergenic. SNP/nt_1000 is the number of SNP * 1000 divided by the length of the snoRNA.