Additional file 2 of A syntelog-based pan-genome provides insights into rice domestication and de-domestication

Additional file 2: Table S1. Meta information of 75 rice genome assemblies used in this study. Table S2. Haplotype divergence between XI and GJ for domestication and improvement genes. Table S3. Putative introgression blocks identified by haplotype divergence between GJ and XI and validation by phylogeny and ABBA-BABA tests. Table S4. Gene functional enrichment in final putative introgression blocks. Table S5. Cloned genes in the putative introgression blocks. Table S6. Structural variations between each pair of weedy and cultivated accessions in agronomy-related gene.