Supplementary Tables

The study Investigated the correlation between fungal diversity and the spread of Epidendrum hybrids in different geographic locations. I hypothesized that Epidendrum hybrids maintain a core group of conserved fungal taxa that demonstrates overlaps among different geographic regions. However, I also anticipated that each region would host its unique fungal community.

In the supplementary tables TS1 and TS3, you will find the single-end forward reads processed through QIIME2 software version 2023.7 for the local and global dataset respectively. These reads underwent denoising, removal of chimera, and filtration of Amplicon Sequencing Variants (ASV) using the DADA2 plugin. Subsequently, supplementary tables TS2 (local dataset) and TS4 (global dataset) present the Operational Taxonomic Units (OTUs) obtained post the application of the 'vsearch' plugin. The taxonomic assignment of these OTUs was executed using the qiime feature classifier plugin, referencing the UNITE fungal database version 9.0 for Qiime2.

本研究探讨了真菌多样性与其在各地域分布的杂交兰属（Epidendrum hybrids）传播之间的相关性。我提出假设，杂交兰属维持着一组核心的保守真菌分类群，这些分类群在不同地理区域间展现出相互重叠。然而，我也预期每个地区都将拥有其独特的真菌群落。在补充表格TS1和TS3中，您将找到通过QIIME2软件版本2023.7处理过的单端正向读段，分别对应局部和全球数据集。这些读段经过去噪、去除嵌合体以及使用DADA2插件过滤扩增子测序变异体（ASV）。随后，补充表格TS2（局部数据集）和TS4（全球数据集）展示了应用‘vsearch’插件后获得的操作分类单元（OTUs）。这些OTUs的分类鉴定是通过qiime特征分类插件完成的，参考了Qiime2版本9.0的UNITE真菌数据库。