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eternagame/OpenKnotAIDesignData: v4.5.2 — M2 single-mutant SHAPE data

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Zenodo2026-06-11 更新2026-06-12 收录
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Add `OK7a_M2_data.v4.5.2.csv`: mutate-and-map (M2) SHAPE data on single-nucleotide mutant libraries for all 20 Round 3 targets × 8 design methods (~100 mutants per design, 14,136 sequences total; median 98 mutants per design, range 52–100). Probed with 2A3 SHAPE (Ultima sequencing, 2025-09-04). Unlike the M2R file, this file contains only `mutA` (no `mutB` or `rescue_factor`). Wild-type rows include new columns `M2_structure`, `M2_F1`, and `M2_F1_crossed_pair` giving the secondary structure inferred from the M2 Z-score contact map by ShapeKnots and its F1 accuracy vs. the target pseudoknot structure. See README for full field descriptions.

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Zenodo
创建时间:
2026-05-09
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