Standing genetic variation and introgression shape the cryptic radiation of Aquilegia in the mountains of Southwest China

This repository contains source data, scripts and workflows used to explore the genomic mechanisms underlying the rapid formation of cryptic diversity in Aquilegia species from the Southwest China. The project is divided into six main parts, covering the filtered SNP datasets, results of betascan, window-based fd, genomic diversity and divergence, protein structure and source data.