Kallisto v0.50.0 expression quantification of day and night phase rRNA depletion RNA-Seq data from P. parvum strain 12B1

Kallisto v0.50.0 was used to quantify the following libraries: SRR23517916 (Night phase; https://trace.ncbi.nlm.nih.gov/Traces?run=SRR23517916) SRR23517917 (Day phase; https://trace.ncbi.nlm.nih.gov/Traces?run=SRR23517917) Against this in silico predicted transcriptome: 12B1_v1.1.gff3__12B1_scaffolds_v1.1.fasta.mRNA.fa (seqkit sum: seqkit.v0.1_DLS_k0_559abfafd14eacd04de9c4d42af781a0) (Available from: https://doi.org/10.5281/zenodo.10023330) SRR23517916 selected results: target_id length eff_length est_counts tpm PKZILLA-1 136088 135896 37629.1 0.713157 PKZILLA-2 92413 92220.9 59960.9 1.67459 PKZILLA-3 73850 73657.9 25959 0.907688 SRR23517917 selected results: target_id length eff_length est_counts tpm PKZILLA-1 136088 135895 66303.4 1.11135 PKZILLA-2 92413 92220.3 98095.6 2.42293 PKZILLA-3 73850 73657.3 1058 0.0327181