Key virulence and resistance genes in isolates HCM3A, HT2001 751, and MW2 as detected by microarray.

*Confirmed with PCR and/or sequencing**Microarray data cannot conclusively prove the location of a gene. Assignation to a MGE is based on known location of that gene in other sequenced strains.hla, α-haemolysin; hlgACB, γ-haemolysin; hld, δ-haemolysin; clf, clumping factors; ST, sequence type using MLST; cap8, capsule type 8; sasG, accumulation associated protein SA2285; coa M0206v, coagulase with four types described; sasA, haemagglutinin like gene which can contain an insert; cna, collagen binding protein; sdr, serine aspartate repeat proteins; fnbpA, fibronectin binding protein with three types described; lytN, cell wall hydrolase; agr, accessory gene regulator with 4 classes described; trap, target of RNAIII activating protein with 2 types described; sarT, staphylococcal accessory regulator T; MGE, mobile genetic element; SCC, staphylococcal cassette chromosome; mec, methicillin resistance; ccr, cassette chromosome recombinase with 3 types described; far1, putative fusidic acid resistance; PV-luk, Panton Valentine leukocidin; seg, enterotoxin G; sak, staphylokinase; sea, enterotoxin A; sek, enterotoxin K; seb, enterotoxin B; sec, enterotoxin C; bla, β-lactamase; cad, cadmium resistance; ars, arsenic resistance; bacteriocin, putative bacteriocin gene SAR0694-5; - denotes gene not detected; #, phage unrelated to PV-luk phage in MW2.