Replication code: Species-level characterization of the cervicovaginal microbiota and its role in HPV-associated cervical carcinogenesis

This replication package includes the documentation to reproduce the epidemiological analyses of the study, "Species-level characterization of the cervicovaginal microbiota and its role in HPV-associated cervical carcinogenesis" by Margaret Logel, Mariam El-Zein, Eduardo L. Franco and Emmanuel Gonzalez. The included files generate 3 main tables, 2 main figures, 11 supplemental tables, and 3 supplemental tables. Analyses were conducted using data from the Methylation Analysis Revealing Key Epigenetic Regulation study. Participants in did not consent to having their data publicly available. To access the data please contact Dr. Eduardo L. Franco at [e-mail]. The license obtained applies to the materials available on the Dataverse and not the data that is available upon request.