MOESM3 of GWAS analyses reveal QTL in egg layers that differ in response to diet differences

Additional file 3. Additional QTL detected using the data for egg quality traits according to age. This file gives the position of the QTL detected with the dataset divided by age, with the top SNP corresponding to the SNP with the highest effect in the QTL region. The QTL is defined by the first (left) and last (right) SNPs that are 1 % significant at the chromosome level, respectively. Var (%) is the percentage of variance explained by the top SNP in the analysis with the whole dataset. Var 50(%) is the percentage of variance explained by the top SNP in the analysis with data for egg collection at 50 weeks only. Var 70(%) is the percentage of variance explained by the top SNP in the analysis with data for egg collection at 70 weeks only. Z Age is the Z test statistic used to compare the two estimates calculated from the data for egg collection at 50 and 70 weeks of age. The difference was significant when P