Multi-species Axiom Plant SNP array
收藏DataCite Commons2020-08-25 更新2024-07-28 收录
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https://figshare.com/articles/Multi-species_Axiom_Plant_SNP_array/12465209/1
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Data for a multi-species Single Nucleotide Polymorphism (SNP) Array built and validated using the Axiom<sup>TM</sup> technology contemplating SNPs for four different plant species as follows:<br><i>Anacardium occidentale</i> (Cashew Nut tree) : 16,504 SNPs<i>Araucaria angustifolia (</i>Brazilian Pine): 3,400 SNPsManihot esculenta (Cassava): 3,417 SNPs<i>Eucalyptus spp. </i>(Eucalypt tree): 2,000 SNPs<br>The data set includes the following information: organism, organism_code, marker_name, probeset ID, marker_id, call_rate_min, call_rate_max, conversion_type according to the Axiom criteria, SNP validation status, chromosome, position, genome_build used for SNP address (when available), probe sequence on array, Allele_A, Allele_B, SNP variant Ordered_Alleles<br>Observation: Although SNPs for the plant <i>Coffea canephora </i>(Coffee) are also part of the Axiom array content, the SNP information for this species could not be made public yet.
提供机构:
figshare
创建时间:
2020-06-11



