Low Complexity Regions for mm10
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下载链接：
https://figshare.com/articles/dataset/Low_Complexity_Regions_for_mm10/1180124
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资源简介：
Li showed that variant calling is unreliable in low-complexity regions in human. These are low-complexity regions for mouse (mm10).
Created with the following code (mm10 fasta from UCSC):
REF=mm10.fa
wget ftp://occams.dfci.harvard.edu/pub/bio/tgi/software/seqclean/seqclean_x86_64.tar.gz
tar xzvf seqclean_x86_64.tar.gz
./seqclean/bin/mdust \
$REF -c \
| awk 'BEGIN{OFS="\t"}{ print $1,$3-1,$4 }' | gzip -c - > LCR-mm10.bed.gz
创建时间：
2014-09-24
