Blocking the expanded miR528 promotes tillering and regrowth in switchgrass (PRJCA017685)

MiRNAs have been reported to be the key regulators involving a wide range of biological processes in diverse plant species, but their functions in switchgrass, an important biofuel and forage crop, are largely unknown. Here, we reported the novel function of miR528, which has expanded to four copies in switchgrass, in controlling biomass trait of tillering number and regeneration after mowing. Blocking miR528 activity by expressing short tandem target mimic (STTM) increased tiller number and regrowth rate after mowing. The quadruple pvmir528 mutant lines derived from genome editing also showed such improved traits. Degradome and RNA-seq analysis, combined with in situ hybridization assay revealed that up-regulation of two miR528 targets coding for Cu/Zn-SOD enzymes, might be responsible for the improved traits of tillering and regrowth in pvmir528 mutant. Additionally, natural variations in the miR528-SOD interaction exist in C3 and C4 monocot species, implying the distinct regulatory strength of miR528-SOD module during monocot evolution. Overall, our data illuminated a novel role of miR528 in controlling biomass traits, and provided a new target for genetic manipulation mediated crop improvement. Samples are the axillary buds of Pvmir528 mutant line miR528 CR-1, CR-2 and its negative control.