Additional file 1 of Genome-wide association study and transcriptome of olecranon-type traits in peach (Prunus persica L.) germplasm

Additional file 1: Supplemental Table S1. List of 456 peach accessions analyzed in this study. The code, name, scientific name, area, and plantation for 456 re-sequenced peach accessions. Olecranon indicates whether the olecranon-type trait is present; 1 means yes, 0 means no, NA means no statistics. Supplemental Table S2. Sequence information on the genomes of 456 peach accessions. N (%) indicates the percentage of failed sequencing nucleotides. Q30 (%) indicates the percentage of 99.9% well-sequenced nucleotides. Ave_depth indicates average covering depth of sample. Cov_ratio_*(%) indicates the percentage of bases at or above a given depth of coverage as a percentage of the total base number of the reference genome. Properly mapped (%) indicates the percentage of the sequenced data mapped to the reference genomes. Supplemental Table S3. Single-nucleotide polymorphism statistics detected between sample and reference genome. Supplemental Table S4. Statistics of single-nucleotide polymorphism annotation results of samples Supplemental Table S5. Statistics of insertion-deletion annotation results of samples. Supplemental Table S6. Statistical table of genes within 1Mb upstream and downstream of main genome-wide association study sites of olecranon type traits. Supplementary table S7. Clean data statistical table. After the original fastq data were further filtered for short reads and low-quality reads, the total clean data were obtained. A-1; A-2; A-3: Olecranon honey peach; B-1; B-2; B-3: Round peach. Supplementary table S8. Full-length sequence and comparison with reference transcriptome results. Supplementary table S9. Statistical table of the number of annotated genes and transcripts. Supplementary table S10. Statistics of gene expression in round peach and olecranon peach.Supplementary table S11. Statistics of transcripts expression in the round peach and the olecranon peach. The nucleic acid sequence of the ONT gene is as follows.