Data used in the article "Cryptic disease-induced mortality may cause host extinction in an apparently-stable host-parasite system"

These data files include all the capture-history matrices that were used in the article, including two matrices with the age of captured individuals (adults or juveniles) according to the definition presented in the main text. Infection intensity (zoospore equivalents per swab) is provided in separate files for all Rhinoderma darwinii and Eupsophus contulmoensis individuals that tested positive for Batrachochytrium dendrobatidis infection. Also, the R code used for the fully paramaterized matrix population model 1 (including figures) is provided. Other codes used to analyze our data, especifically capture-recapture models, were obtained from Kéry and Schaub 2012 (Bayesian population analysis using WinBUGS. A hierarchical perspective. Waltham, USA: Academic Press.)