Inflammation gene members with histone acetylation in their annotated promoters.

Listed are representative genes of the results from the integration of gene expression and ChIP-seq data.
Table shows gene name and chromosome position (Chr.Pos); TSS position, annotated transcription start site (hg19); P-value (Student's t- test) and fold change due to LPS stimulation; H3Ac peaks presence in annotated promoter (−2 Kb/+1 Kb of TSS, hg 19); the effect of LPS, Peak extension; direction of chromatin expansion (→, upstream only; ←, downstream only; ↔ up- and downstream; -, no expansion); P5S RNAPII peaks (MACS) in annotated promoters (−2 Kb/+1 Kb of TSS in hg19); Sp1 peaks (MACS) in annotated promoters (−2 Kb/+1 Kb of TSS in hg19); CpG island presence in promoter (−2 Kb/+1 Kb of TSS); TATA boxin silico finding (−150 bp/+50 bp of TSS).