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Uehata et al. single-cell ATAC-seq dataset of hematopoietic stem and progenitor cells

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Figshare2023-08-28 更新2026-04-08 收录
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https://figshare.com/articles/dataset/Uehata_et_al_single-cell_ATAC-seq_dataset_of_hematopoietic_stem_and_progenitor_cells/24040575/1
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资源简介:
A Seurat object (.rds format) for a single-cell ATAC-seq dataset of hematopoietic stem and progenitor cells. It includes 4 samples:controlDKO (<i>Reg1</i><sup>–/–</sup><i>, Reg3</i><sup>–/–</sup>)Nfkbiz<sup>–/–</sup>TKO DKO (<i>Reg1</i><sup>–/–</sup><i>, Reg3</i><sup>–/–</sup> Nfkbiz<sup>–/–</sup>)Data was processed using Seurat and Signac. For more details we refer to the accompanying GitHub repository. In brief, we normalized the data, conducted linear and non-linear dimensionality reduction, clustered cells, calculated "gene activities", and added motif information to the Seurat object.A link to the accompanying paper will be added here after publication.
提供机构:
Vandenbon, Alexis
创建时间:
2023-08-28
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