Plectropomus leopardus genome
收藏DataCite Commons2023-03-06 更新2024-07-29 收录
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https://figshare.com/articles/dataset/Plectropomus_leopardus_genome/21441396/2
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<em>Plectropomus leopardus</em>, as known as leopard coral grouper, is a valuable marine fish that has been gradually artificial breeding. To promote future conservation, molecular breeding and comparative studies, we generated an improved high-quality chromosomal-level genome assembly of leopard coral grouper using Nanopore long-reads, BGI short reads, and the Hi-C sequencing data, as well as protein-coding genes predicted <em>de novo</em> and verified using sufficient transcriptome data. The draft genome of 849.74Mb with 45 contigs and N50 of 35.59 Mb. Finally, a total of 846.49 Mb (99.6%) of based were anchored to 24 pseudo-chromosomes using Hi-C technology. A final set of 27,285 genes is annotated after manual curation of the predicted gene models, and BUSCO analysis yielded a completeness score of 99.5%. This study significantly improves the utility of the grouper genome and is a reference for the study of molecular breeding and fish genomics and biology.
提供机构:
figshare
创建时间:
2022-12-09



