Next-generation sequencing technology enables uniform and impartial assessment of cancer diagnoses and prognosis. However, such studies are mostly type-specific, and capturing shared genomic abnormali
Results from ggCaller, Panaroo, PEPPAN and Roary analysis of simulated datasets described in Chapter 3 of the PhD Thesis "Graph-based and alignment-free analysis of bacterial pangenomes."
Thanks to SOLiD data we get back the sequence of the Tropheryma whipplei Pneumo30 strain (reference strain: Twist). It is for a pan-genome study (16 other T.whipplei strains have been sequenced).
