BioDeepTime: database and compilation code

The archive includes copies, compilation code, documentation and temporary data files for the BioDeepTime database.

Deposited files:

Relational database in SQLite format: biodeeptime_sqlite.zip.

Denormalized database in zipped .csv format: biodeeptime_csv.zip

Denormalized database in zipped .parquet (v1.0) format: biodeeptime_parquet.zip.

Denormalized database in .rds (R version 4.0) format: biodeeptime.rds.

Description of tables and columns: biodeeptime.md.

Database schema: schema.pdf.

Synonymy of sources: Synonymy of sources.xlsx.

Change log and known issues: NEWS.md

Compilation files: bdt_compilation.zip

References in .csv format: references.csv

References in .rds format: references.rds

Reference bibtex entries: references.bib

Bchron ages calculated for Neotoma: neotoma_bchron.rds

This repository accompanies the study BioDeepTime: a database of biodiversity time series for modern and fossil assemblages by Smith et al. (In Press).