five

Full-length transcriptomes of 25 grassland plant species

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DataCite Commons2025-06-01 更新2025-06-15 收录
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https://datadryad.org/dataset/doi:10.5061/dryad.z08kprrpv
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Grasslands are essential, biodiverse ecosystems of economic importance that play a critical role for carbon storage and soil health. Despite their ecological and economic importance, transcriptomic resources for wild grassland species facilitating eco-evolutionary and functional genomic studies remain limited. In this study, we present full-length transcriptomes for shoot tissue of natural accessions of 25 wild grassland plant species collected from the field site of a long-term grassland biodiversity experiment (Jena Experiment). Using PacBio Iso-Seq technology, we generated a total of 522.45 million subreads which were assembled into isoforms for each species separately. This resulted in an average of 49,180 isoforms per species of which 68.6% were successfully annotated against the Swiss-Prot database. Fifty-six percent of the transcripts had complete open reading frames (ORFs), and 29.6% of the transcripts have been identified as non-coding RNAs (ncRNAs) by two prediction tools. This dataset provides a valuable full-length transcriptomic resource for exploring gene expression, alternative splicing, and evolutionary patterns in wild grassland plant species, paving the way for future functional genomics and conservation studies.
提供机构:
Dryad
创建时间:
2025-04-17
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