Additional file 1 of A tetraploidization event shaped the Aquilaria sinensis genome and contributed to the ability of sesquiterpenes synthesis

Additional file 1: Table S1. Number of Homologous Blocks and Gene Pairs Within a Genome or Between Genomes. Table S2. Number of Homologous Genes Within a Genome or Between Genomes. Table S3. Information about the Blocks Related to ECH Events in A. sinensis genome. Table S4. Information about the Blocks Related to AST Events in A. sinensis genome. Table S5. Information about the Blocks Related to ECH Events in Grape Genome. Table S6. Information about the Blocks Related to ECH Events in Cacao Genome. Table S7. Number of Collinearity Blocks, Gene Pairs, and Genes Related to Species Divergence Events Between Genomes. Table S8. Multiple Genome Alignment with Grape as Reference. Table S9. Genome Alignment Between Cacao and A.sinensis.Table S10. A. sinensis Gene Loss Rates and Gene Translocation with Grape as Reference Genome. Table S11. A. sinensis Gene Loss Rates and Gene Translocation with Cacao as Reference Genome. Table S12. Gene Loss in A. sinensis Using Grape and Cacao as References. Table S13. The Observed Distribution of Gene Loss and Translocation Numbers Fitted by Using Different Density Curves of Geometry Distribution. Table S14. Kernel Function Analysis of K S $${K}_{S}$$ Distribution Related to Duplication Events Within each Genome and Between Genomes (before Evolutionary Rate Correction). Table S15. Kernel Function Analysis of K S $${K}_{S}$$ Distribution Related to Duplication Events Within each Genome and Between Genomes (after Evolutionary Rate Correction). Table S16. The Information of Terpenoid Backbone Biosynthesis and Sesquiterpenoid Biosynthesis Genes in the Three Genomes by KEGG. Table S17. Sesquiterpenoid Biosynthesis Genes. Table S18. The Expression Values (TPM) of A. sinensis stems in Three States (intact, wounded 5 days and wounded 5 + 1 days) by RNA-sEq. Table S19. Genomic Data Information.