Additional file 5: of Grapevine comparative early transcriptomic profiling suggests that Flavescence dorée phytoplasma represses plant responses induced by vector feeding in susceptible varieties

Spearman correlation coefficients of all sequenced samples, according to RNA-seq ENCODE standard, 2016 [44]. Spearman correlations were calculated using the “cor” function in R “stats” package. Samples highlighted in colours have been subsequently removed from downstream steps, based on the above Pearson correlations as well as sample clustering after Rlog transformation of data. (XLSX 27 kb)