five

Historical Arabidopsis thaliana genomes from Germany

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NIAID Data Ecosystem2026-05-02 收录
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https://zenodo.org/record/7156188
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We report short-read Illumina sequencing of 35 Arabidopsis thaliana herbarium specimens collected in Southern Germany from 1817 to 1957. The historical genomes were sequenced to an average depth of ~7X. The herbarium-derived sequences showed patterns of degradation typical of ancient DNA with average read lengths of 78 bp, endogenous DNA content between 26%-93% (mean 72%; median 74%) and enrichment of cytosine to thymine substitutions at the read’s termini. We provide the sequences to the public with open access.
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2024-07-16
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