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Angus Sequence Data: Animal 44982

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agdatacommons.nal.usda.gov2024-10-21 更新2025-03-21 收录
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https://agdatacommons.nal.usda.gov/articles/dataset/Angus_Sequence_Data_Animal_44982/24665973/1
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Whole genome sequence data for Bovidae Bos taurus - beef Angus. The data is in "fastq" format. The National Animal Germplasm Program has germplasm for this animal, with the repository number 44982. There are two versions of each file because we did paired end sequencing. There are two reads for each of the 210 data lines (a forward and a reverse read) summing to 420 total. A diagram of this is provided in the Collection Dataset. In the diagram, the two reads would correspond to read 1 and read 3. Resources in this dataset: Resource Title: Animal 44982 Sequence Data - SCINet .File Name: Web Page, url: https://app.globus.org/file-manager?origin_id=904c2108-90cf-11e8-9672-0a6d4e044368&origin_path=/LTS/ADCdatastorage/NAL/published/node32141/ tar file containing 14 files. The files are: RAPiD-Genomics_F112_CSU_136201_P001_WC03_i5-515_i7-123_S27_L003_R1_001.fastq.gz RAPiD-Genomics_F112_CSU_136201_P001_WC03_i5-515_i7-123_S27_L003_R2_001.fastq.gz RAPiD-Genomics-F113-CSU-136201-P001-WC03-i5-515-i7-123_S163_L002_R1_001.fastq.gz RAPiD-Genomics-F113-CSU-136201-P001-WC03-i5-515-i7-123_S163_L002_R2_001.fastq.gz RAPiD-Genomics-F113-CSU-136201-P001-WC03-i5-515-i7-123_S27_L001_R1_001.fastq.gz RAPiD-Genomics-F113-CSU-136201-P001-WC03-i5-515-i7-123_S27_L001_R2_001.fastq.gz RAPiD-Genomics-F114-CSU-136201-P001-WC03-i5-515-i7-123_S27_L003_R1_001.fastq.gz RAPiD-Genomics-F114-CSU-136201-P001-WC03-i5-515-i7-123_S27_L003_R2_001.fastq.gz RAPiD-Genomics_F115_CSU_136201_P001_WC03_i5-515_i7-123_S27_L001_R1_001.fastq.gz RAPiD-Genomics_F115_CSU_136201_P001_WC03_i5-515_i7-123_S27_L001_R2_001.fastq.gz RAPiD-Genomics_F115_CSU_136201_P001_WC03_i5-515_i7-123_S27_L002_R1_001.fastq.gz RAPiD-Genomics_F115_CSU_136201_P001_WC03_i5-515_i7-123_S27_L002_R2_001.fastq.gz RAPiD-Genomics_F116_CSU_136201_P001_WC03_i5-515_i7-123_S382_L002_R1_001.fastq.gz RAPiD-Genomics_F116_CSU_136201_P001_WC03_i5-515_i7-123_S382_L002_R2_001.fastq.gz SCINet users: The .tar file can be accessed/retrieved with valid SCINet account at this location: /LTS/ADCdatastorage/NAL/published/node32141/44982.tar See the SCINet File Transfer guide for more information on moving large files: https://scinet.usda.gov/guides/data/datatransfer Globus users: The files can also be accessed through Globus by following this data link. The user will need to log in to Globus in order to retrieve this data. User accounts are free of charge with several options for signing on. Instructions for creating an account are on the login page.

全基因组序列数据集,针对牛科动物Bos taurus - 安格斯牛肉。数据以“fastq”格式存储。国家动物种质计划保存了该动物的种质,库编号为44982。每个文件包含两个版本,因为我们进行了双端测序。每个数据线(共210条)对应两个读取(正向和反向读取),总计420个读取。该数据集的采集数据中提供了示意图,图中所示的两个读取分别对应于读取1和读取3。本数据集包含以下资源: 资源标题:动物44982序列数据 - SCINet 文件名:网页,网址:https://app.globus.org/file-manager?origin_id=904c2108-90cf-11e8-9672-0a6d4e044368&origin_path=/LTS/ADCdatastorage/NAL/published/node32141/ 包含14个文件的tar包。文件包括: RAPiD-Genomics_F112_CSU_136201_P001_WC03_i5-515_i7-123_S27_L003_R1_001.fastq.gz RAPiD-Genomics_F112_CSU_136201_P001_WC03_i5-515_i7-123_S27_L003_R2_001.fastq.gz ...(此处省略中间文件名,但格式保持一致)... RAPiD-Genomics_F116_CSU_136201_P001_WC03_i5-515_i7-123_S382_L002_R2_001.fastq.gz SCINet用户:.tar文件可通过有效的SCINet账户在此位置访问/检索:/LTS/ADCdatastorage/NAL/published/node32141/44982.tar。有关移动大型文件的更多信息,请参阅SCINet文件传输指南:https://scinet.usda.gov/guides/data/datatransfer Globus用户:通过Globus也可访问这些文件。用户需要登录Globus以检索此数据。用户账户免费,并提供多种登录选项。创建账户的说明位于登录页面。
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