Frequency of hits to HMM models associated with T6SS and/or phages/tailocins.
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Each row corresponds to a group of genomic loci defined by unsupervised community detection. The first columns report the final classification after manual inspection, along with summary statistics including the number of genomes and loci contained in each unsupervised community. The next three columns show the number of profile markers found in more than 50% of the loci within each community. The remaining columns correspond to individual HMMs and indicate the percentage of loci from each classification that match the given HMM. Color code: dark green, HMMs with hits in T6SS, phages, and/or tailocins (not used for system classification); blue, T6SS-specific markers; light green, phage tail components; red, other phage components; gray, ATPases (not used for system classification). The data and code needed to generate this table can be found in https://doi.org/10.5281/zenodo.18590644. (XLSX)
创建时间:
2026-03-17



