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The Influence of Transcript Assembly on Proteogenomics Discovery of Microproteins

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Supplementary dataset for "The Influence of Transcript Assembly on Proteogenomics Discovery of Microproteins" This dataset contains paired RNA-Seq reads simulated with flux-simulator in fastq.gz format. In addition, the flux-simulator parameter file is included as hg19.par. These are located in the flux_simulator folder. The reads were generated from the human hg19 genome in order to test transcript assembly. The hg19 refseq annotation was used to define genes (see hg19_refseq.gtf). The hg19 chromosome sequence files (e.g. chr1.fa) are also included for completeness. These are located in the hg19 folder.
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2018-01-29
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